I agree with Howard that all tear out and other flaws do not always need to be repaired, that is one of the reasons I don't fix flaws until after I apply the initial finish. I'm not suggesting that you throw away your sand paper and card scraper or that you fully finish your piece. I'm talking about flaws like you have that won't go away with normal procedures. After you put your first coat of finish on you can see if the flaws stick out like a sore thumb or not, if they do you fix them, if they don't forget them and move on. Once that first coat is on you can see what color you are trying to match, what ever filler you use, it makes it easier to color your filler to match because you already can see what your wood will look like with finish on it. Most all wood fillers contain a bulking agent usually wood dust and silica ( the silica causes it not to shrink), a binder ( oil, varnish, acrylic, glue ) and a thinner (water, mineral spirits ), because of the silica and binder none of them take stain or finish the same as the wood you are filling, some are better than others but you almost always need to do some kind of touch up, for me it is easier when I can already see what the wood will look like with finish on it.